8FB9 image
Entry Detail
PDB ID:
8FB9
EMDB ID:
Keywords:
Title:
LH2-LH3 antenna in anti parallel configuration embedded in a nanodisc
Biological Source:
PDB Version:
Deposition Date:
2022-11-29
Release Date:
2023-07-19
Method Details:
Experimental Method:
Resolution:
6.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Light-harvesting protein B800-820 alpha chain
Chain IDs:A, C (auth: D), E (auth: C), G, I, K, M (auth: c), O (auth: e)
Chain Length:56
Number of Molecules:8
Biological Source:Magnetospirillum molischianum
Polymer Type:polypeptide(L)
Description:Light-harvesting protein B800-820 beta chain
Chain IDs:B, D (auth: E), F, H, J, L, N (auth: d), P (auth: f)
Chain Length:45
Number of Molecules:8
Biological Source:Magnetospirillum molischianum
Polymer Type:polypeptide(L)
Description:Light-harvesting protein B-800/850 alpha chain
Chain IDs:Q (auth: M), S (auth: O), U (auth: Q), W (auth: S), Y (auth: U), AA (auth: W), CA (auth: Y), EA (auth: a)
Chain Length:56
Number of Molecules:8
Biological Source:Magnetospirillum molischianum
Polymer Type:polypeptide(L)
Description:Light-harvesting protein B-800/850 beta 1 chain
Chain IDs:R (auth: N), T (auth: P), V (auth: R), X (auth: T), Z (auth: V), BA (auth: X), DA (auth: Z), FA (auth: b)
Chain Length:45
Number of Molecules:8
Biological Source:Magnetospirillum molischianum
Primary Citation
Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.
Proc.Natl.Acad.Sci.USA 120 e2220477120 e2220477120 (2023)
PMID: 37399405 DOI: 10.1073/pnas.2220477120

Abstact

In photosynthesis, absorbed light energy transfers through a network of antenna proteins with near-unity quantum efficiency to reach the reaction center, which initiates the downstream biochemical reactions. While the energy transfer dynamics within individual antenna proteins have been extensively studied over the past decades, the dynamics between the proteins are poorly understood due to the heterogeneous organization of the network. Previously reported timescales averaged over such heterogeneity, obscuring individual interprotein energy transfer steps. Here, we isolated and interrogated interprotein energy transfer by embedding two variants of the primary antenna protein from purple bacteria, light-harvesting complex 2 (LH2), together into a near-native membrane disc, known as a nanodisc. We integrated ultrafast transient absorption spectroscopy, quantum dynamics simulations, and cryogenic electron microscopy to determine interprotein energy transfer timescales. By varying the diameter of the nanodiscs, we replicated a range of distances between the proteins. The closest distance possible between neighboring LH2, which is the most common in native membranes, is 25 Å and resulted in a timescale of 5.7 ps. Larger distances of 28 to 31 Å resulted in timescales of 10 to 14 ps. Corresponding simulations showed that the fast energy transfer steps between closely spaced LH2 increase transport distances by ∼15%. Overall, our results introduce a framework for well-controlled studies of interprotein energy transfer dynamics and suggest that protein pairs serve as the primary pathway for the efficient transport of solar energy.

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