8FAZ image
Deposition Date 2022-11-29
Release Date 2023-06-21
Last Version Date 2025-05-28
Entry Detail
PDB ID:
8FAZ
Keywords:
Title:
Cryo-EM structure of the human BCDX2 complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA repair protein RAD51 homolog 2
Gene (Uniprot):RAD51B
Chain IDs:A (auth: B)
Chain Length:356
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA repair protein RAD51 homolog 3
Gene (Uniprot):RAD51C
Chain IDs:B (auth: C)
Chain Length:376
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA repair protein RAD51 homolog 4
Gene (Uniprot):RAD51D
Chain IDs:C (auth: D)
Chain Length:328
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA repair protein XRCC2
Gene (Uniprot):XRCC2
Chain IDs:D (auth: X)
Chain Length:288
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural insights into BCDX2 complex function in homologous recombination.
Nature 619 640 649 (2023)
PMID: 37344589 DOI: 10.1038/s41586-023-06219-w

Abstact

Homologous recombination (HR) fulfils a pivotal role in the repair of DNA double-strand breaks and collapsed replication forks1. HR depends on the products of several paralogues of RAD51, including the tetrameric complex of RAD51B, RAD51C, RAD51D and XRCC2 (BCDX2)2. BCDX2 functions as a mediator of nucleoprotein filament assembly by RAD51 and single-stranded DNA (ssDNA) during HR, but its mechanism remains undefined. Here we report cryogenic electron microscopy reconstructions of human BCDX2 in apo and ssDNA-bound states. The structures reveal how the amino-terminal domains of RAD51B, RAD51C and RAD51D participate in inter-subunit interactions that underpin complex formation and ssDNA-binding specificity. Single-molecule DNA curtain analysis yields insights into how BCDX2 enhances RAD51-ssDNA nucleoprotein filament assembly. Moreover, our cryogenic electron microscopy and functional analyses explain how RAD51C alterations found in patients with cancer3-6 inactivate DNA binding and the HR mediator activity of BCDX2. Our findings shed light on the role of BCDX2 in HR and provide a foundation for understanding how pathogenic alterations in BCDX2 impact genome repair.

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Primary Citation of related structures