8FA9 image
Entry Detail
PDB ID:
8FA9
Keywords:
Title:
Crystal structure of Ky15.5 Fab in complex with circumsporozoite protein NPDP peptide
Biological Source:
PDB Version:
Deposition Date:
2022-11-25
Release Date:
2023-11-01
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ky15.5 Antibody, heavy chain
Chain IDs:A (auth: H)
Chain Length:228
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Ky15.5 Antibody, light chain
Chain IDs:B (auth: L)
Chain Length:213
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Circumsporozoite protein NPDP peptide
Chain IDs:C (auth: P)
Chain Length:16
Number of Molecules:1
Biological Source:Plasmodium falciparum (isolate NF54)
Primary Citation
Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep 42 113330 113330 (2023)
PMID: 38007690 DOI: 10.1016/j.celrep.2023.113330

Abstact

IGHV3-33-encoded antibodies are prevalent in the human humoral response against the Plasmodium falciparum circumsporozoite protein (PfCSP). Among VH3-33 antibodies, cross-reactivity between PfCSP major repeat (NANP), minor (NVDP), and junctional (NPDP) motifs is associated with high affinity and potent parasite inhibition. However, the molecular basis of antibody cross-reactivity and the relationship with efficacy remain unresolved. Here, we perform an extensive structure-function characterization of 12 VH3-33 anti-PfCSP monoclonal antibodies (mAbs) with varying degrees of cross-reactivity induced by immunization of mice expressing a human immunoglobulin gene repertoire. We identify residues in the antibody paratope that mediate cross-reactive binding and delineate four distinct epitope conformations induced by antibody binding, with one consistently associated with high protective efficacy and another that confers comparably potent inhibition of parasite liver invasion. Our data show a link between molecular features of cross-reactive VH3-33 mAb binding to PfCSP and mAb potency, relevant for the development of antibody-based interventions against malaria.

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