8F8O image
Deposition Date 2022-11-22
Release Date 2022-11-30
Last Version Date 2023-02-22
Entry Detail
PDB ID:
8F8O
Keywords:
HYDROLASE
Title:
Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids
Biological Source:
Source Organism:
Acinetobacter baumannii ATCC 17978 (Taxon ID: 400667)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.10 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 21 21 21
8F8O validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Succinyl-diaminopimelate desuccinylase
Gene (Uniprot):dapE
Chain IDs:A, B
Chain Length:384
Number of Molecules:2
Biological Source:Acinetobacter baumannii ATCC 17978
UniProt ID:A3M8H2 Pfam ID:PF01546, PF07687
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
2OP
CIT
PG4
PGE
SIN
ZN
Primary Citation
Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids
To Be Published ? ? ? (?)
Primary Citation of related structures
8F8O