8F71 image
Deposition Date 2022-11-17
Release Date 2023-11-22
Last Version Date 2024-10-23
Entry Detail
PDB ID:
8F71
Title:
Crystal structure of the histidine kinase domain of bacteriophytochrome RpBphP2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.19 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 61 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histidine kinase
Gene (Uniprot):phyB1
Chain IDs:A, B
Chain Length:261
Number of Molecules:2
Biological Source:Rhodopseudomonas palustris CGA009
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Mode of autophosphorylation in bacteriophytochromes RpBphP2 and RpBphP3.
Photochem Photobiol Sci 22 1257 1266 (2023)
PMID: 36757561 DOI: 10.1007/s43630-023-00366-9

Abstact

Phytochromes are red-light photoreceptors that regulate a wide range of physiological processes in plants, fungi and bacteria. Canonical bacteriophytochromes are photosensory histidine kinases that undergo light-dependent autophosphorylation, thereby regulating cellular responses to red light via two-component signaling pathways. However, the molecular mechanism of kinase activation remains elusive for bacteriophytochromes. In particular, the directionality of autophosphorylation is still an open question in these dimeric photoreceptor kinases. In this work, we perform histidine kinase assays on two tandem bacteriophytochromes RpBphP2 and RpBphP3 from the photosynthetic bacterium Rhodopseudomonas palustris. By examining the kinase activities of full-length bacteriophytochromes and two loss-of-function mutants under different light conditions, we demonstrate that RpBphP2 and RpBphP3 undergo light-dependent trans-phosphorylation between protomers in both homodimeric and heterodimeric forms. We have further determined the crystal structure of the histidine kinase domains of RpBphP2 at 3.19 Å resolution. Based on structural comparisons and homology modeling, we also present a model to account for the actions of trans-autophosphorylation in bacteriophytochromes.

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Primary Citation of related structures
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