8EXH image
Deposition Date 2022-10-25
Release Date 2023-03-22
Last Version Date 2025-05-21
Entry Detail
PDB ID:
8EXH
Keywords:
Title:
Agrobacterium tumefaciens Tpilus
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein virB2
Gene (Uniprot):virB2
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: a), BA (auth: b), CA (auth: c), DA (auth: d), EA (auth: e), FA (auth: f), GA (auth: g), HA (auth: h), IA (auth: i), JA (auth: j), KA (auth: k), LA (auth: l), MA (auth: m), NA (auth: n)
Chain Length:69
Number of Molecules:40
Biological Source:Agrobacterium fabrum (strain C58 / ATCC 33970)
Ligand Molecules
Primary Citation
Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery
Nat Commun 14 666 666 (2023)
PMID: 36750723 DOI: 10.1038/s41467-023-36349-8

Abstact

Conjugation is a major mechanism of horizontal gene transfer promoting the spread of antibiotic resistance among human pathogens. It involves establishing a junction between a donor and a recipient cell via an extracellular appendage known as the mating pilus. In bacteria, the conjugation machinery is encoded by plasmids or transposons and typically mediates the transfer of cognate mobile genetic elements. Much less is known about conjugation in archaea. Here, we determine atomic structures by cryo-electron microscopy of three conjugative pili, two from hyperthermophilic archaea (Aeropyrum pernix and Pyrobaculum calidifontis) and one encoded by the Ti plasmid of the bacterium Agrobacterium tumefaciens, and show that the archaeal pili are homologous to bacterial mating pili. However, the archaeal conjugation machinery, known as Ced, has been 'domesticated', that is, the genes for the conjugation machinery are encoded on the chromosome rather than on mobile genetic elements, and mediates the transfer of cellular DNA.

Legend

Protein

Chemical

Disease

Primary Citation of related structures