8ET4 image
Entry Detail
PDB ID:
8ET4
Keywords:
Title:
Crystal structure of wild-type arabidopsis thaliana acetohydroxyacid synthase in complex with amidosulfuron
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-10-16
Release Date:
2023-03-29
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 64 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Acetolactate synthase, chloroplastic
Chain IDs:A
Chain Length:590
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSD A CYS modified residue
Primary Citation
Crystal Structure of the Commercial Herbicide, Amidosulfuron, in Complex with Arabidopsis thaliana Acetohydroxyacid Synthase.
J.Agric.Food Chem. 71 5117 5126 (2023)
PMID: 36943718 DOI: 10.1021/acs.jafc.2c08528

Abstact

Amidosulfuron (AS) is from the commercial sulfonylurea herbicide family. It is highly effective against dicot broad-leaf weeds. This herbicide targets acetohydroxyacid synthase (AHAS), the first enzyme in the branched chain amino acid biosynthesis pathway. Here, we have determined the crystal structure of AS in complex with wildtype Arabidopsis thaliana AHAS (AtAHAS) and with the resistance mutant, S653T. In both structures, the cofactor, ThDP, is modified to a peracetate adduct, consistent with time-dependent accumulative inhibition. Compared to other AHAS-inhibiting herbicides of the sulfonylurea family, AS lacks a second aromatic ring. The replacement is an aryl sulfonyl group with a reduced number of interactions with the enzyme and relatively low affinity (Ki = 4.2 μM vs low nM when two heteroaromatic rings are present). This study shows that effective herbicides can have a relatively high Ki for plant AHAS but can still be a potent herbicide provided accumulative inhibition also occurs.

Legend

Protein

Chemical

Disease

Primary Citation of related structures