8ES7 image
Entry Detail
PDB ID:
8ES7
EMDB ID:
Keywords:
Title:
CryoEM structure of PN45545 TCR-CD3 complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-10-13
Release Date:
2023-05-03
Method Details:
Experimental Method:
Resolution:
3.04 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PN45545 TCR alpha chain
Chain IDs:G (auth: A)
Chain Length:278
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:PN45545 TCR beta chain
Chain IDs:H (auth: B)
Chain Length:319
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-cell surface glycoprotein CD3 delta chain
Chain IDs:C (auth: D)
Chain Length:174
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-cell surface glycoprotein CD3 epsilon chain
Chain IDs:D (auth: F), F (auth: E)
Chain Length:211
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-cell surface glycoprotein CD3 gamma chain
Chain IDs:E (auth: G)
Chain Length:185
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-cell surface glycoprotein CD3 zeta chain
Chain IDs:A (auth: Z), B (auth: Y)
Chain Length:173
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun 14 2401 2401 (2023)
PMID: 37100770 DOI: 10.1038/s41467-023-37532-7

Abstact

The recognition of antigenic peptide-MHC (pMHC) molecules by T-cell receptors (TCR) initiates the T-cell mediated immune response. Structural characterization is key for understanding the specificity of TCR-pMHC interactions and informing the development of therapeutics. Despite the rapid rise of single particle cryoelectron microscopy (cryoEM), x-ray crystallography has remained the preferred method for structure determination of TCR-pMHC complexes. Here, we report cryoEM structures of two distinct full-length α/β TCR-CD3 complexes bound to their pMHC ligand, the cancer-testis antigen HLA-A2/MAGEA4 (230-239). We also determined cryoEM structures of pMHCs containing MAGEA4 (230-239) peptide and the closely related MAGEA8 (232-241) peptide in the absence of TCR, which provided a structural explanation for the MAGEA4 preference displayed by the TCRs. These findings provide insights into the TCR recognition of a clinically relevant cancer antigen and demonstrate the utility of cryoEM for high-resolution structural analysis of TCR-pMHC interactions.

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