8EQ9 image
Deposition Date 2022-10-07
Release Date 2022-11-30
Last Version Date 2023-10-25
Entry Detail
PDB ID:
8EQ9
Title:
Co-crystal structure of PERK with compound 11
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.86 Å
R-Value Free:
0.27
R-Value Work:
0.23
Space Group:
P 32 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Eukaryotic translation initiation factor 2-alpha kinase 3
Gene (Uniprot):EIF2AK3
Chain IDs:A (auth: AAA)
Chain Length:317
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Optimization of a Novel Mandelamide-Derived Pyrrolopyrimidine Series of PERK Inhibitors.
Pharmaceutics 14 ? ? (2022)
PMID: 36297668 DOI: 10.3390/pharmaceutics14102233

Abstact

The protein kinase R (PKR)-like endoplasmic reticulum kinase (PERK) is one of three endoplasmic reticulum (ER) transmembrane sensors of the unfolded protein response (UPR) responsible for regulating protein synthesis and alleviating ER stress. PERK has been implicated in tumorigenesis, cancer cell survival as well metabolic diseases such as diabetes. The structure-based design and optimization of a novel mandelamide-derived pyrrolopyrimidine series of PERK inhibitors as described herein, resulted in the identification of compound 26, a potent, selective, and orally bioavailable compound suitable for interrogating PERK pathway biology in vitro and in vivo, with pharmacokinetics suitable for once-a-day oral dosing in mice.

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Primary Citation of related structures