8END image
Entry Detail
PDB ID:
8END
Title:
Crystal structure of LGR ligand alpha2/beta5 from C. elegans in crystal form 1 (SeMet)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-09-29
Release Date:
2023-01-11
Method Details:
Experimental Method:
Resolution:
3.54 Å
R-Value Free:
0.32
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Bursicon
Chain IDs:A
Chain Length:92
Number of Molecules:1
Biological Source:Caenorhabditis elegans
Polymer Type:polypeptide(L)
Description:Cys_knot domain-containing protein
Chain IDs:B
Chain Length:106
Number of Molecules:1
Biological Source:Caenorhabditis elegans
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Crystal structure of LGR ligand alpha2/beta5 from Caenorhabditis elegans with implications for the evolution of glycoprotein hormones
Proc Natl Acad Sci U S A 120 e2218630120 ? (2023)
PMID: 36574673 DOI: 10.1073/pnas.2218630120

Abstact

A family of leucine-rich-repeat-containing G-protein-coupled receptors (LGRs) mediate diverse physiological responses when complexed with their cognate ligands. LGRs are present in all metazoan animals. In humans, the LGR ligands include glycoprotein hormones (GPHs) chorionic gonadotropin (hCG), luteinizing hormone, follicle-stimulating hormone (hFSH), and thyroid-stimulating hormone (hTSH). These hormones are αβ heterodimers of cystine-knot protein chains. LGRs and their ligand chains have coevolved. Ancestral hormone homologs, present in both bilaterian animals and chordates, are identified as α2β5. We have used single-wavelength anomalous diffraction and molecular replacement to determine structures of the α2β5 hormone from Caenorhabditis elegans (Ceα2β5). Ceα2β5 is unglycosylated, as are many other α2β5 hormones. Both Hsα2β5, the human homolog of Ceα2β5, and hTSH activate the same receptor (hTSHR). Despite having little sequence similarity to vertebrate GPHs, apart from the cysteine patterns from core disulfide bridges, Ceα2β5 is generally similar in structure to these counterparts; however, its α2 and β5 subunits are more symmetric as compared with α and β of hCG and hFSH. This quasisymmetry suggests a hypothetical homodimeric antecedent of the α2β5 and αβ heterodimers. Known structures together with AlphaFold models from the sequences for other LGR ligands provide representatives for the molecular evolution of LGR ligands from early metazoans through the present-day GPHs. The experimental Ceα2β5 structure validates its AlphaFold model, and thus also that for Hsα2β5; and interfacial characteristics in a model for the Hsα2β5:hTSHR complex are similar to those found in an experimental hTSH:hTSHR structure.

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Primary Citation of related structures