8EL6 image
Deposition Date 2022-09-23
Release Date 2023-10-25
Last Version Date 2024-10-16
Entry Detail
PDB ID:
8EL6
Keywords:
Title:
Light harvesting phycobiliprotein HaPE555 from the cryptophyte Hemiselmis andersenii CCMP644 with an altered helix hA/hY conformation
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.25
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Phycoerythrin alpha-1 subunit
Chain IDs:A, F
Chain Length:67
Number of Molecules:2
Biological Source:Hemiselmis andersenii
Polymer Type:polypeptide(L)
Molecule:Phycoerythrin550 beta subunit
Chain IDs:B, D
Chain Length:177
Number of Molecules:2
Biological Source:Hemiselmis andersenii
Polymer Type:polypeptide(L)
Molecule:Phycoerythrin alpha-2 subunit
Gene (Uniprot):HAND1043_LOCUS7931
Chain IDs:C, E
Chain Length:62
Number of Molecules:2
Biological Source:Hemiselmis andersenii
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
LYZ A LYS modified residue
Primary Citation
Molecular dissection of the soluble photosynthetic antenna from the cryptophyte alga Hemiselmis andersenii.
Commun Biol 6 1158 1158 (2023)
PMID: 37957226 DOI: 10.1038/s42003-023-05508-4

Abstact

Cryptophyte algae have a unique phycobiliprotein light-harvesting antenna that fills a spectral gap in chlorophyll absorption from photosystems. However, it is unclear how the antenna transfers energy efficiently to these photosystems. We show that the cryptophyte Hemiselmis andersenii expresses an energetically complex antenna comprising three distinct spectrotypes of phycobiliprotein, each composed of two αβ protomers but with different quaternary structures arising from a diverse α subunit family. We report crystal structures of the major phycobiliprotein from each spectrotype. Two-thirds of the antenna consists of open quaternary form phycobiliproteins acting as primary photon acceptors. These are supplemented by a newly discovered open-braced form (~15%), where an insertion in the α subunit produces ~10 nm absorbance red-shift. The final components (~15%) are closed forms with a long wavelength spectral feature due to substitution of a single chromophore. This chromophore is present on only one β subunit where asymmetry is dictated by the corresponding α subunit. This chromophore creates spectral overlap with chlorophyll, thus bridging the energetic gap between the phycobiliprotein antenna and the photosystems. We propose that the macromolecular organization of the cryptophyte antenna consists of bulk open and open-braced forms that transfer excitations to photosystems via this bridging closed form phycobiliprotein.

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Primary Citation of related structures