ISDA

Deposition Date 2022-09-21

Release Date 2023-09-27

Last Version Date 2023-09-27

Entry Detail

PDB ID:

8EKK

Keywords:

TOXIN

Title:

Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 2

Biological Source:

Source Organism:

Clostridioides difficile R20291 (Taxon ID: 645463)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.28 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:ADP-ribosyltransferase binding component
Chain IDs:A, B, C, D, E, F, G
Chain Length:667
Number of Molecules:7
Biological Source:Clostridioides difficile R20291

UniProt ID:A0A9R0BM17 Pfam ID:PF03495, PF17475, PF17476

Ligand Molecules

Primary Citation

Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin

Abeyawardhane, D.L, Adipietro, K.A, Ruiz, R.G, Varney, K.M, Rustandi, R.R, Silin, V.I, Pozharski, E, Weber, D.J.Show

To Be Published ? ? ? (?)

Primary Citation of related structures