8EKI image
Deposition Date 2022-09-21
Release Date 2023-10-04
Last Version Date 2024-02-28
Entry Detail
PDB ID:
8EKI
Title:
CryoEM structure of the Dsl1 complex bound to SNAREs Sec20 and Use1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein SEC20
Gene (Uniprot):SEC20
Chain IDs:A
Chain Length:275
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein USE1
Gene (Uniprot):USE1
Chain IDs:B
Chain Length:212
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein TIP20
Gene (Uniprot):TIP20
Chain IDs:C
Chain Length:701
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein SEC39
Gene (Uniprot):SEC39
Chain IDs:D
Chain Length:709
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein DSL1
Gene (Uniprot):DSL1
Chain IDs:E
Chain Length:783
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Ligand Molecules
Primary Citation
Structure of a membrane tethering complex incorporating multiple SNAREs.
Nat.Struct.Mol.Biol. 31 246 254 (2024)
PMID: 38196032 DOI: 10.1038/s41594-023-01164-8

Abstact

Most membrane fusion reactions in eukaryotic cells are mediated by multisubunit tethering complexes (MTCs) and SNARE proteins. MTCs are much larger than SNAREs and are thought to mediate the initial attachment of two membranes. Complementary SNAREs then form membrane-bridging complexes whose assembly draws the membranes together for fusion. Here we present a cryo-electron microscopy structure of the simplest known MTC, the 255-kDa Dsl1 complex of Saccharomyces cerevisiae, bound to the two SNAREs that anchor it to the endoplasmic reticulum. N-terminal domains of the SNAREs form an integral part of the structure, stabilizing a Dsl1 complex configuration with unexpected similarities to the 850-kDa exocyst MTC. The structure of the SNARE-anchored Dsl1 complex and its comparison with exocyst reveal what are likely to be common principles underlying MTC function. Our structure also implies that tethers and SNAREs can work together as a single integrated machine.

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