8EK1 image
Entry Detail
PDB ID:
8EK1
EMDB ID:
Keywords:
Title:
Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(dominant class)
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2022-09-19
Release Date:
2023-03-15
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:L9 Fab heavy chain
Chain IDs:A, C, E (auth: H)
Chain Length:227
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:L9 Fab light chain
Chain IDs:B, D, F (auth: L)
Chain Length:214
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Circumsporozoite protein
Mutations:C-79S, K-38S, K-37S, R-34A
Chain IDs:G (auth: P)
Chain Length:355
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Ligand Molecules
Primary Citation
Cryo-EM structures of anti-malarial antibody L9 with circumsporozoite protein reveal trimeric L9 association and complete 27-residue epitope.
Structure 31 480 491.e4 (2023)
PMID: 36931276 DOI: 10.1016/j.str.2023.02.009

Abstact

Monoclonal antibody L9 recognizes the Plasmodium falciparum circumsporozoite protein (PfCSP) and is highly protective following controlled human malaria challenge. To gain insight into its function, we determined cryoelectron microscopy (cryo-EM) structures of L9 in complex with full-length PfCSP and assessed how this recognition influenced protection by wild-type and mutant L9s. Cryo-EM reconstructions at 3.6- and 3.7-Å resolution revealed L9 to recognize PfCSP as an atypical trimer. Each of the three L9s in the trimer directly recognized an Asn-Pro-Asn-Val (NPNV) tetrapeptide on PfCSP and interacted homotypically to facilitate L9-trimer assembly. We analyzed peptides containing different repeat tetrapeptides for binding to wild-type and mutant L9s to delineate epitope and homotypic components of L9 recognition; we found both components necessary for potent malaria protection. Last, we found the 27-residue stretch recognized by L9 to be highly conserved in P. falciparum isolates, suggesting the newly revealed complete L9 epitope to be an attractive vaccine target.

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Primary Citation of related structures