8E66 image
Deposition Date 2022-08-22
Release Date 2023-08-30
Last Version Date 2023-08-30
Entry Detail
PDB ID:
8E66
Keywords:
DNA BINDING PROTEIN/DNA
Title:
ETV6 H396Y variant bound to DNA containing the sequence GGAA
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.35 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 1 21 1
8E66 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transcription factor ETV6
Chain IDs:C (auth: A), F
Chain Length:100
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P97360 Pfam ID:PF00178
Polymer Type:polydeoxyribonucleotide
Molecule:GGAA-containing 15 bp DNA
Chain IDs:A (auth: B), D
Chain Length:15
Number of Molecules:2
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:Complementary 15 bp strand
Chain IDs:B (auth: C), E
Chain Length:15
Number of Molecules:2
Biological Source:synthetic construct
Ligand Molecules
CAC
Primary Citation
The functional role of histidine within the ETV6 ETS domain
to be published ? ? ? (?)
Primary Citation of related structures
8E66