8E30 image
Entry Detail
PDB ID:
8E30
EMDB ID:
EMD-27852
Keywords:
RIBOSOME/ANTIBIOTIC
Title:
E. coli 50S ribosome bound to compound streptogramin A analog 3142
Biological Source:
Source Organism:
Escherichia coli
Host Organism:
Escherichia coli
PDB Version:
Deposition Date:
2022-08-16
Release Date:
2023-06-28
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
1.91 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8E30 validation report
Macromolecular Entities
Polymer Type:polyribonucleotide
Description:23S ribosomal RNA
Chain IDs:A (auth: I)
Chain Length:2904
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polyribonucleotide
Description:5S ribosomal RNA
Chain IDs:B (auth: J)
Chain Length:118
Number of Molecules:1
Biological Source:Escherichia coli
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L2
Chain IDs:C (auth: K)
Chain Length:271
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P60422 Pfam ID:PF00181, PF03947
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L15
Chain IDs:D (auth: L)
Chain Length:144
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P02413 Pfam ID:PF00828
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L4
Chain IDs:E (auth: M)
Chain Length:201
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P60723 Pfam ID:PF00573
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L3
Chain IDs:F (auth: N)
Chain Length:209
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P60438 Pfam ID:PF00297
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L13
Chain IDs:G (auth: O)
Chain Length:142
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P0AA10 Pfam ID:PF00572
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L22
Chain IDs:H (auth: P)
Chain Length:110
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P61175 Pfam ID:PF00237
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L32
Chain IDs:I (auth: Q)
Chain Length:56
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P0A7N4 Pfam ID:PF01783
Protein Blast
Polymer Type:polypeptide(L)
Description:50S ribosomal protein L34
Chain IDs:J (auth: R)
Chain Length:46
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P0A7P5 Pfam ID:PF00468
Ligand Molecules
UE6
Primary Citation
Potential for clicked streptogramin analogs
To Be Published ? ? ? (?)
Primary Citation of related structures
8E30