8E1W image
Deposition Date 2022-08-11
Release Date 2023-01-11
Last Version Date 2024-04-03
Entry Detail
PDB ID:
8E1W
Keywords:
Title:
Neutron crystal structure of Panus similis AA9A at room temperature
Biological Source:
Source Organism:
Panus similis (Taxon ID: 292560)
Host Organism:
Method Details:
R-Value Free:
['0.17
R-Value Work:
['0.14
R-Value Observed:
['0.14
Space Group:
P 41 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Endo-beta-1,4-glucanase D
Gene (Uniprot):LPMO9A
Chain IDs:A
Chain Length:235
Number of Molecules:1
Biological Source:Panus similis
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
HIC A HIS modified residue
Primary Citation
Joint X-ray/neutron structure of Lentinus similis AA9_A at room temperature.
Acta Crystallogr.,Sect.F 79 1 7 (2023)
PMID: 36598350 DOI: 10.1107/S2053230X22011335

Abstact

Lytic polysaccharide monooxygenases (LPMOs) are copper metalloenzymes which cleave polysaccharides oxidatively and are important in pathogen biology, carbon cycling and biotechnology. The Lentinus similis family AA9 isoform A (LsAA9_A) has been extensively studied as a model system because its activity towards smaller soluble saccharide substrates has allowed detailed structural characterization of its interaction with a variety of substrates by X-ray crystallography at high resolution. Here, the joint X-ray/neutron room-temperature crystallographic structure of carbohydrate-free LsAA9_A in the copper(II) resting state refined against X-ray and neutron data at 2.1 and 2.8 Å resolution, respectively, is presented. The results provide an experimental determination of the protonation states of the copper(II)-coordinating residues and second-shell residues in LsAA9_A, paving the way for future neutron crystallographic studies of LPMO-carbohydrate complexes.

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Primary Citation of related structures