8DZY image
Deposition Date 2022-08-08
Release Date 2022-08-24
Last Version Date 2023-11-15
Entry Detail
PDB ID:
8DZY
Keywords:
SIGNALING PROTEIN
Title:
Crystal structure of photoactive yellow protein (PYP); F96oCNF I49T construct
Biological Source:
Source Organism:
Halorhodospira halophila (Taxon ID: 1053)
Host Organism:
Escherichia coli str. K-12 substr. DH10B
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.01 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 63
8DZY validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photoactive yellow protein
Gene (Uniprot):pyp
Chain IDs:A
Chain Length:125
Number of Molecules:1
Biological Source:Halorhodospira halophila
UniProt ID:P16113 Pfam ID:PF00989
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
9IJ A PHE modified residue
Ligand Molecules
HC4
Primary Citation
Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published ? ? ? (?)
Primary Citation of related structures
8DZY