8DYN image
Deposition Date 2022-08-04
Release Date 2022-12-07
Last Version Date 2024-05-15
Entry Detail
PDB ID:
8DYN
Keywords:
Title:
Antimicrobial lasso peptide cloacaenodin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cloacaenodin
Chain IDs:A
Chain Length:24
Number of Molecules:1
Biological Source:Enterobacter hormaechei
Ligand Molecules
Primary Citation
Cloacaenodin, an Antimicrobial Lasso Peptide with Activity against Enterobacter .
Acs Infect Dis. 9 111 121 (2023)
PMID: 36519726 DOI: 10.1021/acsinfecdis.2c00446

Abstact

Using genome mining and heterologous expression, we report the discovery and production of a new antimicrobial lasso peptide from species related to the Enterobacter cloacae complex. Using NMR and mass spectrometric analysis, we show that this lasso peptide, named cloacaenodin, employs a threaded lasso fold which imparts proteolytic resistance that its unthreaded counterpart lacks. Cloacaenodin has selective, low micromolar, antimicrobial activity against species related to the E. cloacae complex, including species implicated in nosocomial infections and against clinical isolates of carbapenem-resistant Enterobacterales. We further used site-directed mutagenesis to probe the importance of specific residues to the peptide's biosynthesis, stability, and bioactivity.

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Primary Citation of related structures