8DYA image
Entry Detail
PDB ID:
8DYA
EMDB ID:
Keywords:
Title:
Structure of the SARS-CoV-2 spike glycoprotein S2 subunit
Biological Source:
PDB Version:
Deposition Date:
2022-08-03
Release Date:
2022-11-30
Method Details:
Experimental Method:
Resolution:
3.67 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Spike glycoprotein
Mutations:T883C,A892P,A899P,A942P,F970C,V987P,G999C
Chain IDs:A, B, C
Chain Length:624
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2
Ligand Molecules
Primary Citation

Abstact

Numerous safe and effective coronavirus disease 2019 vaccines have been developed worldwide that use various delivery technologies and engineering strategies. We show here that vaccines containing prefusion-stabilizing S mutations elicit antibody responses in humans with enhanced recognition of S and the S1 subunit relative to postfusion S as compared with vaccines lacking these mutations or natural infection. Prefusion S and S1 antibody binding titers positively and equivalently correlated with neutralizing activity, and depletion of S1-directed antibodies completely abrogated plasma neutralizing activity. We show that neutralizing activity is almost entirely directed to the S1 subunit and that variant cross-neutralization is mediated solely by receptor binding domain-specific antibodies. Our data provide a quantitative framework for guiding future S engineering efforts to develop vaccines with higher resilience to the emergence of variants than current technologies.

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Primary Citation of related structures