ISDA

Deposition Date 2022-08-03

Release Date 2023-08-09

Last Version Date 2024-05-22

Entry Detail

PDB ID:

8DXY

Keywords:

DNA

Title:

[T:Au+:T--(pH11-pH7; 180s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 for 180s

Biological Source:

Source Organism:

synthetic construct (Taxon ID: 32630)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

4.87 Å

R-Value Free:

0.22

R-Value Work:

0.17

R-Value Observed:

0.18

Space Group:

H 3

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Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3')
Chain IDs:A
Chain Length:21
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3')
Chain IDs:B
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*GP*CP*TP*GP*CP*T)-3')
Chain IDs:C
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3')
Chain IDs:D
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs

Lu, B, Ohayon, Y.P, Sha, R, Woloszyn, K, Rothschild, L, Wind, S, Hendrickson, W, Mao, C, Seeman, N.C, Vecchioni, S.Show

To Be Published ? ? ? (?)

Primary Citation of related structures