8DPZ image
Deposition Date 2022-07-18
Release Date 2023-08-02
Last Version Date 2025-05-21
Entry Detail
PDB ID:
8DPZ
Keywords:
VIRAL PROTEIN/Immune System
Title:
Local refinement of SARS-CoV-2 vaccine induced antibody DH1338 bound to SARS-CoV-2 HexaPro RBD Spike ectodomain
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Macaca mulatta (Taxon ID: 9544)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.38 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8DPZ validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike protein S1
Gene (Uniprot):S
Chain IDs:A (auth: B)
Chain Length:205
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF09408
Polymer Type:polypeptide(L)
Molecule:DH1338 Fab Heavy Chain
Chain IDs:B (auth: F)
Chain Length:128
Number of Molecules:1
Biological Source:Macaca mulatta
Polymer Type:polypeptide(L)
Molecule:DH1338 Fab Light Chain
Chain IDs:C (auth: G)
Chain Length:107
Number of Molecules:1
Biological Source:Macaca mulatta
Ligand Molecules
NA
Primary Citation
Local refinement of SARS-CoV-2 vaccine induced antibody Ab026500 bound to SARS-CoV-2 HexaPro RBD Spike ectodomain
To Be Published ? ? ? (?)
Primary Citation of related structures
8DPZ