8DOK image
Entry Detail
PDB ID:
8DOK
EMDB ID:
Title:
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2022-07-13
Release Date:
2023-07-19
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:CRF-1_AE T/F100 Env gp120
Chain IDs:A, E, I
Chain Length:486
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Description:CRF-1_AE T/F100 HIV-1 gp41
Chain IDs:B, F, J
Chain Length:155
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Description:Heavy chain of 8ANC195
Chain IDs:C, G, K
Chain Length:238
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Light chain of 8ANC195
Chain IDs:D, H, L
Chain Length:215
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Heavy chain of 10-1074
Chain IDs:M, O, Q
Chain Length:238
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Light chain of 10-1074
Chain IDs:N, P, R
Chain Length:214
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun 14 6710 6710 (2023)
PMID: 37872202 DOI: 10.1038/s41467-023-42500-2

Abstact

The HIV-1 entry inhibitor temsavir prevents the viral receptor CD4 (cluster of differentiation 4) from interacting with the envelope glycoprotein (Env) and blocks its conformational changes. To do this, temsavir relies on the presence of a residue with small side chain at position 375 in Env and is unable to neutralize viral strains like CRF01_AE carrying His375. Here we investigate the mechanism of temsavir resistance and show that residue 375 is not the sole determinant of resistance. At least six additional residues within the gp120 inner domain layers, including five distant from the drug-binding pocket, contribute to resistance. A detailed structure-function analysis using engineered viruses and soluble trimer variants reveals that the molecular basis of resistance is mediated by crosstalk between His375 and the inner domain layers. Furthermore, our data confirm that temsavir can adjust its binding mode to accommodate changes in Env conformation, a property that likely contributes to its broad antiviral activity.

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Primary Citation of related structures