8DL0 image
Entry Detail
PDB ID:
8DL0
EMDB ID:
Keywords:
Title:
CryoEM structure of the nucleotide-free and open channel A.aeolicus WzmWzt transporter
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-07-06
Release Date:
2022-09-21
Method Details:
Experimental Method:
Resolution:
4.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ABC transporter
Chain IDs:A, C
Chain Length:404
Number of Molecules:2
Biological Source:Aquifex aeolicus VF5
Polymer Type:polypeptide(L)
Description:Transport permease protein
Chain IDs:B, D
Chain Length:256
Number of Molecules:2
Biological Source:Aquifex aeolicus VF5
Ligand Molecules
Primary Citation
Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter.
Nat Commun 13 5226 5226 (2022)
PMID: 36064941 DOI: 10.1038/s41467-022-32597-2

Abstact

O antigens are ubiquitous protective extensions of lipopolysaccharides in the extracellular leaflet of the Gram-negative outer membrane. Following biosynthesis in the cytosol, the lipid-linked polysaccharide is transported to the periplasm by the WzmWzt ABC transporter. Often, O antigen secretion requires the chemical modification of its elongating terminus, which the transporter recognizes via a carbohydrate-binding domain (CBD). Here, using components from A. aeolicus, we identify the O antigen structure with methylated mannose or rhamnose as its cap. Crystal and cryo electron microscopy structures reveal how WzmWzt recognizes this cap between its carbohydrate and nucleotide-binding domains in a nucleotide-free state. ATP binding induces drastic conformational changes of its CBD, terminating interactions with the O antigen. ATPase assays and site directed mutagenesis reveal reduced hydrolytic activity upon O antigen binding, likely to facilitate polymer loading into the ABC transporter. Our results elucidate critical steps in the recognition and translocation of polysaccharides by ABC transporters.

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Primary Citation of related structures