8DIT image
Deposition Date 2022-06-29
Release Date 2022-08-31
Last Version Date 2024-02-14
Entry Detail
PDB ID:
8DIT
Keywords:
PROTEIN TRANSPORT
Title:
Cryo-EM structure of a HOPS core complex containing Vps33, Vps16, and Vps18
Biological Source:
Source Organism:
Chaetomium thermophilum (Taxon ID: 209285)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
5.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8DIT validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vacuolar protein sorting-associated protein 33
Chain IDs:A
Chain Length:696
Number of Molecules:1
Biological Source:Chaetomium thermophilum
UniProt ID:G0SCM5 Pfam ID:PF00995
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vacuolar protein sorting-associated protein 16
Chain IDs:B
Chain Length:834
Number of Molecules:1
Biological Source:Chaetomium thermophilum
UniProt ID:G0S6M7 Pfam ID:PF04841, PF04840
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vacuolar protein sorting-associated protein 18
Chain IDs:C
Chain Length:968
Number of Molecules:1
Biological Source:Chaetomium thermophilum
UniProt ID:G0S4R9 Pfam ID:PF05131
Ligand Molecules
NA
Primary Citation
Cryo-EM structure of the HOPS core complex and its implication for SNARE assembly
To Be Published ? ? ? (?)
Primary Citation of related structures
8DIT