ISDA: 8DH6

Deposition Date 2022-06-25

Release Date 2022-07-20

Last Version Date 2025-05-28

Entry Detail

PDB ID:

8DH6

Keywords:

MEMBRANE PROTEIN

Title:

Cryo-EM structure of Saccharomyces cerevisiae cytochrome c oxidase (Complex IV) extracted in lipid nanodiscs

Biological Source:

Source Organism:

Saccharomyces cerevisiae (Taxon ID: 4932)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.94 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 1
Gene (Uniprot):COX1
Chain IDs:A (auth: a)
Chain Length:534
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P00401 Pfam ID:PF00115

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 2
Gene (Uniprot):COX2
Chain IDs:B (auth: b)
Chain Length:236
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P00410 Pfam ID:PF02790, PF00116

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 3
Gene (Uniprot):COX3
Chain IDs:C (auth: c)
Chain Length:269
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P00420 Pfam ID:PF00510

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 4, mitochondrial
Gene (Uniprot):COX4
Chain IDs:D (auth: d)
Chain Length:130
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P04037 Pfam ID:PF01215

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 5A, mitochondrial
Gene (Uniprot):COX5A
Chain IDs:E (auth: e)
Chain Length:133
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P00424 Pfam ID:PF02936

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 6, mitochondrial
Gene (Uniprot):COX6
Chain IDs:F (auth: f)
Chain Length:108
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P00427 Pfam ID:PF02284

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 7, mitochondrial
Gene (Uniprot):COX7
Chain IDs:G (auth: g)
Chain Length:59
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P10174 Pfam ID:PF02238

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 8, mitochondrial
Gene (Uniprot):COX8
Chain IDs:H (auth: h)
Chain Length:51
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P04039 Pfam ID:PF02935

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 9, mitochondrial
Gene (Uniprot):COX9
Chain IDs:I (auth: i)
Chain Length:55
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P07255

Ligand Molecules