8DFT image
Deposition Date 2022-06-22
Release Date 2023-03-22
Last Version Date 2024-09-25
Entry Detail
PDB ID:
8DFT
Keywords:
Title:
Cryo-EM structure of conjugative pili from Pyrobaculum calidifontis
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
4.10 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Pilin protein
Gene (Uniprot):Pcal_0765
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T
Chain Length:112
Number of Molecules:20
Biological Source:Pyrobaculum calidifontis
Ligand Molecules
Primary Citation
Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery.
Nat Commun 14 666 666 (2023)
PMID: 36750723 DOI: 10.1038/s41467-023-36349-8

Abstact

Conjugation is a major mechanism of horizontal gene transfer promoting the spread of antibiotic resistance among human pathogens. It involves establishing a junction between a donor and a recipient cell via an extracellular appendage known as the mating pilus. In bacteria, the conjugation machinery is encoded by plasmids or transposons and typically mediates the transfer of cognate mobile genetic elements. Much less is known about conjugation in archaea. Here, we determine atomic structures by cryo-electron microscopy of three conjugative pili, two from hyperthermophilic archaea (Aeropyrum pernix and Pyrobaculum calidifontis) and one encoded by the Ti plasmid of the bacterium Agrobacterium tumefaciens, and show that the archaeal pili are homologous to bacterial mating pili. However, the archaeal conjugation machinery, known as Ced, has been 'domesticated', that is, the genes for the conjugation machinery are encoded on the chromosome rather than on mobile genetic elements, and mediates the transfer of cellular DNA.

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Primary Citation of related structures