8DB2 image
Entry Detail
PDB ID:
8DB2
Title:
Q108K:K40L:T51C:T53A:R58L:Q38F mutant of hCRBPII bound to synthetic fluorophore CM1V
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-06-14
Release Date:
2023-02-01
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Retinol-binding protein 2
Mutations:Q108K,K40L,T51C,T53A,R58L,Q38F
Chain IDs:A
Chain Length:133
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins.
Analyst 148 1085 1092 (2023)
PMID: 36722993 DOI: 10.1039/d2an01395a

Abstact

Cysteine-based Michael addition is a widely employed strategy for covalent conjugation of proteins, peptides, and drugs. The covalent reaction is irreversible in most cases, leading to a lack of control over the process. Utilizing spectroscopic analyses along with X-ray crystallographic studies, we demonstrate Michael addition of an engineered cysteine residue in human Cellular Retinol Binding Protein II (hCRBPII) with a coumarin analog that creates a non-fluorescent complex. UV-illumination reverses the conjugation, yielding a fluorescent species, presumably through a retro-Michael process. This series of events can be repeated between a bound and non-bound form of the cysteine reversibly, resulting in the ON-OFF control of fluorescence. The details of the mechanism of photoswitching was illuminated by recapitulation of the process in light irradiated single crystals, confirming the mechanism at atomic resolution.

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Primary Citation of related structures