8D5Q image
Entry Detail
PDB ID:
8D5Q
Keywords:
Title:
TCR TG6 in complex with Ld-HF10
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2022-06-05
Release Date:
2022-09-14
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.22
R-Value Work:
0.16
Space Group:
P 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:TCR-alpha
Chain IDs:A
Chain Length:209
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:TCR-beta
Chain IDs:B
Chain Length:244
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:H-2 class I histocompatibility antigen, L-D alpha chain
Chain IDs:C
Chain Length:180
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Dense granule protein 6, HF10 peptide
Chain IDs:D (auth: E)
Chain Length:10
Number of Molecules:1
Biological Source:Toxoplasma gondii
Primary Citation
Peptide Centric V beta Specific Germline Contacts Shape a Specialist T Cell Response.
Front Immunol 13 847092 847092 (2022)
PMID: 35967379 DOI: 10.3389/fimmu.2022.847092

Abstact

Certain CD8 T cell responses are particularly effective at controlling infection, as exemplified by elite control of HIV in individuals harboring HLA-B57. To understand the structural features that contribute to CD8 T cell elite control, we focused on a strongly protective CD8 T cell response directed against a parasite-derived peptide (HF10) presented by an atypical MHC-I molecule, H-2Ld. This response exhibits a focused TCR repertoire dominated by Vβ2, and a representative TCR (TG6) in complex with Ld-HF10 reveals an unusual structure in which both MHC and TCR contribute extensively to peptide specificity, along with a parallel footprint of TCR on its pMHC ligand. The parallel footprint is a common feature of Vβ2-containing TCRs and correlates with an unusual Vα-Vβ interface, CDR loop conformations, and Vβ2-specific germline contacts with peptides. Vβ2 and Ld may represent "specialist" components for antigen recognition that allows for particularly strong and focused T cell responses.

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