8D5J image
Deposition Date 2022-06-04
Release Date 2022-07-06
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8D5J
Keywords:
IMMUNE SYSTEM
Title:
The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.95 Å
R-Value Free:
0.22
R-Value Work:
0.18
Space Group:
C 1 2 1
8D5J validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class I heavy chain maturation peptide H-2K(D)
Chain IDs:A
Chain Length:276
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:P01902 Pfam ID:PF00129, PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2m
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:P01887 Pfam ID:PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pre-mRNA-processing factor 19
Gene (Uniprot):Prpf19
Chain IDs:C
Chain Length:9
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q99KP6
Primary Citation
The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd
To Be Published ? ? ? (?)
Primary Citation of related structures
8D5J