8CT6 image
Deposition Date 2022-05-13
Release Date 2023-04-19
Last Version Date 2025-06-04
Entry Detail
PDB ID:
8CT6
Title:
1F8 mAb in complex with the computationally optimized broadly reactive H1 influenza hemagglutinin P1
Biological Source:
Source Organism:
Influenza A virus (Taxon ID: 11320)
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:COBRA P1 HA
Chain IDs:A (auth: B), B (auth: A), C
Chain Length:562
Number of Molecules:3
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:1F8 heavy chain
Chain IDs:E (auth: H), G (auth: J)
Chain Length:222
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:1F8 light chain
Chain IDs:D (auth: L), F (auth: K)
Chain Length:218
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structural insights into the broad protection against H1 influenza viruses by a computationally optimized hemagglutinin vaccine.
Commun Biol 6 454 454 (2023)
PMID: 37185989 DOI: 10.1038/s42003-023-04793-3

Abstact

Influenza virus poses an ongoing human health threat with pandemic potential. Due to mutations in circulating strains, formulating effective vaccines remains a challenge. The use of computationally optimized broadly reactive antigen (COBRA) hemagglutinin (HA) proteins is a promising vaccine strategy to protect against a wide range of current and future influenza viruses. Though effective in preclinical studies, the mechanistic basis driving the broad reactivity of COBRA proteins remains to be elucidated. Here, we report the crystal structure of the COBRA HA termed P1 and identify antigenic and glycosylation properties that contribute to its immunogenicity. We further report the cryo-EM structure of the P1-elicited broadly neutralizing antibody 1F8 bound to COBRA P1, revealing 1F8 to recognize an atypical receptor binding site epitope via an unexpected mode of binding.

Legend

Protein

Chemical

Disease

Primary Citation of related structures