8CR0 image
Entry Detail
PDB ID:
8CR0
Keywords:
Title:
Crystal structure of human carbonic anhydrase II in complex with a triazolyl benzoxaborole inhibitor
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-03-07
Release Date:
2023-06-21
Method Details:
Experimental Method:
Resolution:
1.22 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Carbonic anhydrase 2
Chain IDs:A (auth: X)
Chain Length:260
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
6-Substituted Triazolyl Benzoxaboroles as Selective Carbonic Anhydrase Inhibitors: In Silico Design, Synthesis, and X-ray Crystallography.
J.Med.Chem. 66 8118 8129 (2023)
PMID: 37283561 DOI: 10.1021/acs.jmedchem.3c00433

Abstact

Benzoxaborole is currently a scaffold of great relevance in medicinal chemistry. In 2016, it was reported to be a new and valuable chemotype for designing carbonic anhydrase (CA) inhibitors. Herein, using an in silico design, we report the synthesis and characterization of substituted 6-(1H-1,2,3-triazol-1-yl)benzoxaboroles. 6-Azidobenzoxaborole was described for the first time as a molecular platform to prepare libraries of inhibitors by a copper(I)-catalyzed azide-alkyne cycloaddition via a click chemistry strategy. With inhibition constants below 30 nM, some derivatives, such as compound 20, showed efficacy as selective hCA VII and IX inhibitors. The design hypothesis was validated by crystallographic investigation on the hCA II/20 adduct, which provided explanations over the different inhibition behavior observed against the five evaluated hCA isoforms. Overall, this study identified 20 as a new promising lead compound to develop novel anticancer agents targeting the tumor-associated hCA IX but also potent neuropathic pain relievers targeting hCA VII.

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