8CQW image
Deposition Date 2023-03-07
Release Date 2024-09-18
Last Version Date 2025-04-30
Entry Detail
PDB ID:
8CQW
Keywords:
Title:
Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.05 Å
R-Value Free:
0.30
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L20
Gene (Uniprot):RPL20B
Chain IDs:U (auth: 0), VC (auth: BN)
Chain Length:172
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polyribonucleotide
Molecule:25S
Chain IDs:A (auth: 1), BC (auth: AS)
Chain Length:3359
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L12-A
Gene (Uniprot):RPL12A
Chain IDs:DF (auth: 12)
Chain Length:165
Number of Molecules:1
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L21-A
Gene (Uniprot):RPL21A
Chain IDs:V (auth: 2), WC (auth: BO)
Chain Length:160
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polyribonucleotide
Molecule:5S
Chain IDs:B (auth: 3), CC (auth: AT)
Chain Length:121
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polyribonucleotide
Molecule:5.8S
Chain IDs:C (auth: 4), DC (auth: AU)
Chain Length:158
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L22-B
Gene (Uniprot):RPL22B
Chain IDs:W (auth: 5), XC (auth: BP)
Chain Length:124
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23-A
Gene (Uniprot):RPL23A
Chain IDs:X (auth: 6), YC (auth: BQ)
Chain Length:137
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L24-A
Gene (Uniprot):RPL24A
Chain IDs:Y (auth: 7), ZC (auth: BR)
Chain Length:155
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L25
Gene (Uniprot):RPL25
Chain IDs:Z (auth: 8), AD (auth: BS)
Chain Length:142
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L24
Gene (Uniprot):FOB64_002422
Chain IDs:AA (auth: 9), BD (auth: BT)
Chain Length:127
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27
Gene (Uniprot):RPL27
Chain IDs:BA (auth: AA), CD (auth: BU)
Chain Length:136
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L28
Gene (Uniprot):RPL28
Chain IDs:CA (auth: AB), DD (auth: BV)
Chain Length:149
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L29
Gene (Uniprot):RPL29
Chain IDs:DA (auth: AC), ED (auth: BW)
Chain Length:63
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L30
Gene (Uniprot):RPL30
Chain IDs:EA (auth: AD), FD (auth: BX)
Chain Length:106
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L31-B
Gene (Uniprot):RPL31B
Chain IDs:FA (auth: AE), GD (auth: BY)
Chain Length:112
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L32
Gene (Uniprot):RPL32
Chain IDs:GA (auth: AF), HD (auth: BZ)
Chain Length:131
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L33-A
Gene (Uniprot):RPL33A
Chain IDs:HA (auth: AG), ID (auth: CA)
Chain Length:107
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L34-B
Gene (Uniprot):RPL34B
Chain IDs:IA (auth: AH), JD (auth: CB)
Chain Length:122
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L29
Gene (Uniprot):FOB64_000276
Chain IDs:JA (auth: AI), KD (auth: CC)
Chain Length:120
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36
Gene (Uniprot):RPL36
Chain IDs:KA (auth: AJ), LD (auth: CD)
Chain Length:99
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L37-B
Gene (Uniprot):RPL37B
Chain IDs:LA (auth: AK), MD (auth: CE)
Chain Length:90
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L38
Gene (Uniprot):RPL38
Chain IDs:MA (auth: AL), ND (auth: CF)
Chain Length:78
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L39
Gene (Uniprot):RPL39
Chain IDs:NA (auth: AM), OD (auth: CG)
Chain Length:51
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L40-B
Gene (Uniprot):RPL40B
Chain IDs:OA (auth: AN), PD (auth: CH)
Chain Length:52
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L41
Gene (Uniprot):RPL41
Chain IDs:PA (auth: AO), QD (auth: CI)
Chain Length:25
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L42-B
Gene (Uniprot):RPL42B
Chain IDs:QA (auth: AP), RD (auth: CJ)
Chain Length:106
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L43-A
Gene (Uniprot):RPL43A
Chain IDs:RA (auth: AQ), SD (auth: CK)
Chain Length:92
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein subunit beta-like protein
Gene (Uniprot):ASC1
Chain IDs:AC (auth: AR), BF (auth: DT)
Chain Length:317
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polyribonucleotide
Molecule:18S
Chain IDs:TA (auth: B), UD (auth: CM)
Chain Length:1787
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S0
Gene (Uniprot):RPS0
Chain IDs:UA (auth: C), VD (auth: CN)
Chain Length:119
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S1
Gene (Uniprot):RPS1
Chain IDs:VA (auth: D), WD (auth: CO)
Chain Length:256
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S5
Gene (Uniprot):FOB64_002335, FOB64_002811
Chain IDs:WA (auth: E), XD (auth: CP)
Chain Length:249
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S3
Gene (Uniprot):FOB64_004345
Chain IDs:XA (auth: F), YD (auth: CQ)
Chain Length:251
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S4
Gene (Uniprot):RPS42
Chain IDs:YA (auth: G), ZD (auth: CR)
Chain Length:262
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S7
Gene (Uniprot):FOB64_006628
Chain IDs:ZA (auth: H), AE (auth: CS)
Chain Length:225
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S6
Gene (Uniprot):RPS6A
Chain IDs:AB (auth: I), BE (auth: CT)
Chain Length:236
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S7
Gene (Uniprot):RPS7A
Chain IDs:BB (auth: J), CE (auth: CU)
Chain Length:186
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S8
Gene (Uniprot):FOB64_005152
Chain IDs:CB (auth: K), DE (auth: CV)
Chain Length:206
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S4
Gene (Uniprot):FOB64_004972
Chain IDs:DB (auth: L), EE (auth: CW)
Chain Length:189
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein
Gene (Uniprot):RPL1B
Chain IDs:EF (auth: L1), FF (auth: l1)
Chain Length:217
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S10-A
Gene (Uniprot):RPS10A
Chain IDs:EB (auth: M), FE (auth: CX)
Chain Length:118
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11A
Gene (Uniprot):CAALFM_C501540WA
Chain IDs:FB (auth: N), GE (auth: CY)
Chain Length:155
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S12
Gene (Uniprot):RPS12
Chain IDs:GB (auth: O), HE (auth: CZ)
Chain Length:143
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S13
Gene (Uniprot):RPS13
Chain IDs:HB (auth: P), IE (auth: DA)
Chain Length:151
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S acidic ribosomal protein P0
Gene (Uniprot):CaJ7.0118
Chain IDs:CF (auth: P0), GF (auth: p0)
Chain Length:312
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S14-A
Gene (Uniprot):RPS14A
Chain IDs:IB (auth: Q), JE (auth: DB)
Chain Length:132
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15
Gene (Uniprot):RPS15
Chain IDs:JB (auth: R), KE (auth: DC)
Chain Length:142
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S16
Gene (Uniprot):RPS16
Chain IDs:KB (auth: S), LE (auth: DD)
Chain Length:142
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S17-B
Gene (Uniprot):RPS17B
Chain IDs:LB (auth: T), ME (auth: DE)
Chain Length:137
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S18-B
Gene (Uniprot):RPS18B
Chain IDs:MB (auth: U), NE (auth: DF)
Chain Length:145
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19-A
Gene (Uniprot):RPS19A
Chain IDs:NB (auth: V), OE (auth: DG)
Chain Length:145
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S10
Gene (Uniprot):FOB64_004041
Chain IDs:OB (auth: W), PE (auth: DH)
Chain Length:119
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S21
Gene (Uniprot):RPS21
Chain IDs:PB (auth: X), QE (auth: DI)
Chain Length:87
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S22-A
Gene (Uniprot):RPS22A
Chain IDs:QB (auth: Y), RE (auth: DJ)
Chain Length:130
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S23 (S12)
Gene (Uniprot):FOB64_006094
Chain IDs:RB (auth: Z), SE (auth: DK)
Chain Length:145
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S24
Gene (Uniprot):RPS24B
Chain IDs:SB (auth: a), TE (auth: DL)
Chain Length:135
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S25
Gene (Uniprot):RPS25A
Chain IDs:TB (auth: b), UE (auth: DM)
Chain Length:1787
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S26
Gene (Uniprot):RPS26A
Chain IDs:UB (auth: c), VE (auth: DN)
Chain Length:119
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S27
Gene (Uniprot):RPS27B
Chain IDs:VB (auth: d), WE (auth: DO)
Chain Length:256
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S28-B
Gene (Uniprot):RPS28B
Chain IDs:WB (auth: e), XE (auth: DP)
Chain Length:67
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S29A
Gene (Uniprot):CAALFM_CR08480CA, orf19.6415.1
Chain IDs:XB (auth: f), YE (auth: DQ)
Chain Length:56
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S30
Gene (Uniprot):RPS30
Chain IDs:YB (auth: g), ZE (auth: DR)
Chain Length:63
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-40S ribosomal protein S31 fusion protein
Gene (Uniprot):UBI3
Chain IDs:ZB (auth: h), AF (auth: DS)
Chain Length:193
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein CAALFM_C304810CA
Gene (Uniprot):STM1
Chain IDs:SA (auth: i), TD (auth: CL)
Chain Length:267
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L2-B
Gene (Uniprot):RPL2B
Chain IDs:D (auth: j), EC (auth: AW)
Chain Length:254
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L3
Gene (Uniprot):RPL3
Chain IDs:E (auth: k), FC (auth: AX)
Chain Length:389
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L4-B
Gene (Uniprot):RPL4B
Chain IDs:F (auth: l), GC (auth: AY)
Chain Length:363
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein CaJ7.0206
Gene (Uniprot):CaJ7.0206
Chain IDs:G (auth: m), HC (auth: AZ)
Chain Length:298
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6
Gene (Uniprot):rpl16
Chain IDs:H (auth: n), IC (auth: BA)
Chain Length:176
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7-A
Gene (Uniprot):RPL7A
Chain IDs:I (auth: o), JC (auth: BB)
Chain Length:241
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L8
Gene (Uniprot):RPL8B
Chain IDs:J (auth: p), KC (auth: BC)
Chain Length:262
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L9-B
Gene (Uniprot):RPL9B
Chain IDs:K (auth: q), LC (auth: BD)
Chain Length:191
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10
Gene (Uniprot):RPL10
Chain IDs:L (auth: r), MC (auth: BE)
Chain Length:220
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L11-B
Gene (Uniprot):RPL11B
Chain IDs:M (auth: s), NC (auth: BF)
Chain Length:174
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13
Gene (Uniprot):RPL13
Chain IDs:N (auth: t), OC (auth: BG)
Chain Length:202
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L14-B
Gene (Uniprot):RPL14B
Chain IDs:O (auth: u), PC (auth: BH)
Chain Length:131
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L15-A
Gene (Uniprot):RPL15A
Chain IDs:P (auth: v), QC (auth: BI)
Chain Length:204
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L13
Gene (Uniprot):FOB64_002221
Chain IDs:Q (auth: w), RC (auth: BJ)
Chain Length:200
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L22
Gene (Uniprot):FOB64_005064
Chain IDs:R (auth: x), SC (auth: BK)
Chain Length:185
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18-A
Gene (Uniprot):RPL18A
Chain IDs:S (auth: y), TC (auth: BL)
Chain Length:186
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L19-A
Gene (Uniprot):RPL19A
Chain IDs:T (auth: z), UC (auth: BM)
Chain Length:190
Number of Molecules:2
Biological Source:Candida albicans
Primary Citation
Mechanism of read-through enhancement by aminoglycosides and mefloquine
Proc.Natl.Acad.Sci.USA ? ? ? (2025)
DOI: 10.1073/pnas.2420261122
Primary Citation of related structures