8CP8 image
Entry Detail
PDB ID:
8CP8
Keywords:
Title:
Crystal structure of an 8-repeat consensus TPR superhelix with Lead
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-03-02
Release Date:
2024-03-13
Method Details:
Experimental Method:
Resolution:
1.68 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Consensus tetratricopeptide repeat protein
Chain IDs:A, B
Chain Length:292
Number of Molecules:2
Biological Source:synthetic construct
Primary Citation
Diverse crystalline protein scaffolds through metal-dependent polymorphism.
Protein Sci. 33 e4971 e4971 (2024)
PMID: 38591647 DOI: 10.1002/pro.4971

Abstact

As protein crystals are increasingly finding diverse applications as scaffolds, controlled crystal polymorphism presents a facile strategy to form crystalline assemblies with controllable porosity with minimal to no protein engineering. Polymorphs of consensus tetratricopeptide repeat proteins with varying porosity were obtained through co-crystallization with metal salts, exploiting the innate metal ion geometric requirements. A single structurally exposed negative amino acid cluster was responsible for metal coordination, despite the abundance of negatively charged residues. Density functional theory calculations showed that while most of the crystals were the most thermodynamically stable assemblies, some were kinetically trapped states. Thus, crystalline porosity diversity is achieved and controlled with metal coordination, opening a new scope in the application of proteins as biocompatible protein-metal-organic frameworks (POFs). In addition, metal-dependent polymorphic crystals allow direct comparison of metal coordination preferences.

Legend

Protein

Chemical

Disease

Primary Citation of related structures