8COB image
Deposition Date 2023-02-27
Release Date 2023-04-19
Last Version Date 2024-11-20
Entry Detail
PDB ID:
8COB
Title:
Crystal structure of human PCNA in complex with ERCC6L2 PIP box peptide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.73 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proliferating cell nuclear antigen
Gene (Uniprot):PCNA
Chain IDs:A, C, E
Chain Length:261
Number of Molecules:3
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA excision repair protein ERCC-6-like 2
Chain IDs:B, D, F
Chain Length:15
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
ERCC6L2 mitigates replication stress and promotes centromere stability.
Cell Rep 42 112329 112329 (2023)
PMID: 37014751 DOI: 10.1016/j.celrep.2023.112329

Abstact

Structurally complex genomic regions, such as centromeres, are inherently difficult to duplicate. The mechanism behind centromere inheritance is not well understood, and one of the key questions relates to the reassembly of centromeric chromatin following DNA replication. Here, we define ERCC6L2 as a key regulator of this process. ERCC6L2 accumulates at centromeres and promotes deposition of core centromeric factors. Interestingly, ERCC6L2-/- cells show unrestrained replication of centromeric DNA, likely caused by the erosion of centromeric chromatin. Beyond centromeres, ERCC6L2 facilitates replication at genomic repeats and non-canonical DNA structures. Notably, ERCC6L2 interacts with the DNA-clamp PCNA through an atypical peptide, presented here in a co-crystal structure. Finally, ERCC6L2 also restricts DNA end resection, acting independently of the 53BP1-REV7-Shieldin complex. We propose a mechanistic model, which reconciles seemingly distinct functions of ERCC6L2 in DNA repair and DNA replication. These findings provide a molecular context for studies linking ERCC6L2 to human disease.

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Primary Citation of related structures