ISDA: 8CII

Deposition Date 2023-02-09

Release Date 2024-02-21

Last Version Date 2024-11-06

Entry Detail

PDB ID:

8CII

Keywords:

VIRUS

Title:

Delta-RBD complex with BA.2-07 fab, SARS1-34 fab and C1 nanobody

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Lama glama (Taxon ID: 9844)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.70 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:BA.2-07 fab Heavy Chain
Chain IDs:D (auth: A)
Chain Length:231
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:BA.2-07 fab Light Chain
Chain IDs:E (auth: B)
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:C1 nanobody
Chain IDs:F (auth: C)
Chain Length:131
Number of Molecules:1
Biological Source:Lama glama

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike protein S2'
Gene (Uniprot):S
Chain IDs:A (auth: E)
Chain Length:202
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P0DTC2 Pfam ID:PF09408

Polymer Type:polypeptide(L)
Molecule:SARS1-34 fab Heavy Chain
Chain IDs:B (auth: H)
Chain Length:227
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:SARS1-34 fab Light Chain
Chain IDs:C (auth: L)
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

Primary Citation

Potent cross-reactive mAbs from BA.4/5 breakthrough infection

Duyvesteyn, H.M.E, Screaton, G, Ren, J, Stuart, D.I, Fry, E.E.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

Feedback Form