8CI4 image
Entry Detail
PDB ID:
8CI4
Title:
Crystal structure of doubly S-methanethiolated rabbit M-type creatine kinase
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-02-08
Release Date:
2023-12-13
Method Details:
Experimental Method:
Resolution:
2.01 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 4 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Creatine kinase M-type
Chain IDs:A
Chain Length:381
Number of Molecules:1
Biological Source:Oryctolagus cuniculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SCH A CYS modified residue
Ligand Molecules
Primary Citation
Chemical Zymogens and Transmembrane Activation of Transcription in Synthetic Cells.
Adv Mater 36 e2309385 e2309385 (2024)
PMID: 38009384 DOI: 10.1002/adma.202309385

Abstact

In this work, synthetic cells equipped with an artificial signaling pathway that connects an extracellular trigger event to the activation of intracellular transcription are engineered. Learning from nature, this is done via an engineering of responsive enzymes, such that activation of enzymatic activity can be triggered by an external biochemical stimulus. Reversibly deactivated creatine kinase to achieve triggered production of adenosine triphosphate, and a reversibly deactivated nucleic acid polymerase for on-demand synthesis of RNA are engineered. An extracellular, enzyme-activated production of a diffusible zymogen activator is also designed. The key achievement of this work is that the importance of cellularity is illustrated whereby the separation of biochemical partners is essential to resolve their incompatibility, to enable transcription within the confines of a synthetic cell. The herein designed biochemical pathway and the engineered synthetic cells are arguably primitive compared to their natural counterpart. Nevertheless, the results present a significant step toward the design of synthetic cells with responsive behavior, en route from abiotic to life-like cell mimics.

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Primary Citation of related structures