8CG7 image
Entry Detail
PDB ID:
8CG7
Keywords:
Title:
Structure of p53 cancer mutant Y220C with arylation at Cys182 and Cys277
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-02-03
Release Date:
2023-12-13
Method Details:
Experimental Method:
Resolution:
1.53 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cellular tumor antigen p53
Chain IDs:A, B
Chain Length:219
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structure-Reactivity Studies of 2-Sulfonylpyrimidines Allow Selective Protein Arylation.
Bioconjug.Chem. 34 1679 1687 (2023)
PMID: 37657082 DOI: 10.1021/acs.bioconjchem.3c00322

Abstact

Protein arylation has attracted much attention for developing new classes of bioconjugates with improved properties. Here, we have evaluated 2-sulfonylpyrimidines as covalent warheads for the mild, chemoselective, and metal free cysteine S-arylation. 2-Sulfonylpyrimidines react rapidly with cysteine, resulting in stable S-heteroarylated adducts at neutral pH. Fine tuning the heterocyclic core and exocyclic leaving group allowed predictable SNAr reactivity in vitro, covering >9 orders of magnitude. Finally, we achieved fast chemo- and regiospecific arylation of a mutant p53 protein and confirmed arylation sites by protein X-ray crystallography. Hence, we report the first example of a protein site specifically S-arylated with iodo-aromatic motifs. Overall, this study provides the most comprehensive structure-reactivity relationship to date on heteroaryl sulfones and highlights 2-sulfonylpyrimidine as a synthetically tractable and protein compatible covalent motif for targeting reactive cysteines, expanding the arsenal of tunable warheads for modern covalent ligand discovery.

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