8CE1 image
Deposition Date 2023-02-01
Release Date 2023-09-06
Last Version Date 2025-07-02
Entry Detail
PDB ID:
8CE1
Title:
Cytochrome c maturation complex CcmABCD
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.47 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome c biogenesis ATP-binding export protein CcmA
Gene (Uniprot):ccmA
Chain IDs:A (auth: a), E (auth: A)
Chain Length:218
Number of Molecules:2
Biological Source:Escherichia coli
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Heme exporter protein B
Gene (Uniprot):ccmB
Chain IDs:B (auth: b), F (auth: B)
Chain Length:220
Number of Molecules:2
Biological Source:Escherichia coli
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Heme exporter protein C
Gene (Uniprot):ccmC
Chain IDs:C (auth: c), G (auth: C)
Chain Length:245
Number of Molecules:2
Biological Source:Escherichia coli K-12
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Heme exporter protein D
Gene (Uniprot):ccmD
Chain IDs:D (auth: d), H (auth: D)
Chain Length:69
Number of Molecules:2
Biological Source:Escherichia coli K-12
Ligand Molecules
Primary Citation
Architecture of the Heme-translocating CcmABCD/E complex required for Cytochrome c maturation.
Nat Commun 14 5190 5190 (2023)
PMID: 37626034 DOI: 10.1038/s41467-023-40881-y

Abstact

Mono- and multiheme cytochromes c are post-translationally matured by the covalent attachment of heme. For this, Escherichia coli employs the most complex type of maturation machineries, the Ccm-system (for cytochrome c maturation). It consists of two membrane protein complexes, one of which shuttles heme across the membrane to a mobile chaperone that then delivers the cofactor to the second complex, an apoprotein:heme lyase, for covalent attachment. Here we report cryo-electron microscopic structures of the heme translocation complex CcmABCD from E. coli, alone and bound to the heme chaperone CcmE. CcmABCD forms a heterooctameric complex centered around the ABC transporter CcmAB that does not by itself transport heme. Our data suggest that the complex flops a heme group from the inner to the outer leaflet at its CcmBC interfaces, driven by ATP hydrolysis at CcmA. A conserved heme-handling motif (WxWD) at the periplasmic side of CcmC rotates the heme by 90° for covalent attachment to the heme chaperone CcmE that we find interacting exclusively with the CcmB subunit.

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Primary Citation of related structures
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