8CAU image
Deposition Date 2023-01-24
Release Date 2023-10-11
Last Version Date 2025-07-09
Entry Detail
PDB ID:
8CAU
Title:
human alpha7 nicotinic receptor in complex with the C4 nanobody and nicotine
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Vicugna pacos (Taxon ID: 30538)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Neuronal acetylcholine receptor subunit alpha-7
Gene (Uniprot):CHRNA7
Chain IDs:A, B, C, D, E
Chain Length:492
Number of Molecules:5
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Nanobody C4
Chain IDs:F, G, H, I, J
Chain Length:147
Number of Molecules:5
Biological Source:Vicugna pacos
Primary Citation
An original potentiating mechanism revealed by the cryo-EM structures of the human alpha 7 nicotinic receptor in complex with nanobodies.
Nat Commun 14 5964 5964 (2023)
PMID: 37749098 DOI: 10.1038/s41467-023-41734-4

Abstact

The human α7 nicotinic receptor is a pentameric channel mediating cellular and neuronal communication. It has attracted considerable interest in designing ligands for the treatment of neurological and psychiatric disorders. To develop a novel class of α7 ligands, we recently generated two nanobodies named E3 and C4, acting as positive allosteric modulator and silent allosteric ligand, respectively. Here, we solved the cryo-electron microscopy structures of the nanobody-receptor complexes. E3 and C4 bind to a common epitope involving two subunits at the apex of the receptor. They form by themselves a symmetric pentameric assembly that extends the extracellular domain. Unlike C4, the binding of E3 drives an agonist-bound conformation of the extracellular domain in the absence of an orthosteric agonist, and mutational analysis shows a key contribution of an N-linked sugar moiety in mediating E3 potentiation. The nanobody E3, by remotely controlling the global allosteric conformation of the receptor, implements an original mechanism of regulation that opens new avenues for drug design.

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Primary Citation of related structures