8C9Y image
Entry Detail
PDB ID:
8C9Y
Title:
The MK-RSL - sulfonato-calix[8]arene complex, H32 form
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-01-23
Release Date:
2023-07-12
Method Details:
Experimental Method:
Resolution:
1.18 Å
R-Value Free:
0.17
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Putative fucose-binding lectin protein
Mutations:M0, S1K
Chain IDs:A
Chain Length:91
Number of Molecules:1
Biological Source:Ralstonia solanacearum
Primary Citation
Protein-macrocycle polymorphism: crystal form IV of the Ralstonia solanacearum lectin-sulfonato-calix[8]arene complex.
Acta Crystallogr D Struct Biol 79 624 631 (2023)
PMID: 37314405 DOI: 10.1107/S2059798323003832

Abstact

Controlled protein assembly and crystallization is necessary as a means of generating diffraction-quality crystals as well as providing a basis for new types of biomaterials. Water-soluble calixarenes are useful mediators of protein crystallization. Recently, it was demonstrated that Ralstonia solanacearum lectin (RSL) co-crystallizes with anionic sulfonato-calix[8]arene (sclx8) in three space groups. Two of these co-crystals only grow at pH ≤ 4 where the protein is cationic, and the crystal packing is dominated by the calixarene. This paper describes a fourth RSL-sclx8 co-crystal, which was discovered while working with a cation-enriched mutant. Crystal form IV grows at high ionic strength in the pH range 5-6. While possessing some features in common with the previous forms, the new structure reveals alternative calixarene binding modes. The occurrence of C2-symmetric assemblies, with the calixarene at special positions, appears to be an important result for framework fabrication. Questions arise regarding crystal screening and exhaustive searching for polymorphs.

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