8C4P image
Entry Detail
PDB ID:
8C4P
Keywords:
Title:
CdaA-compound 7 complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-01-04
Release Date:
2023-06-07
Method Details:
Experimental Method:
Resolution:
1.20 Å
R-Value Free:
0.16
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Diadenylate cyclase
Chain IDs:A, B
Chain Length:178
Number of Molecules:2
Biological Source:Listeria monocytogenes
Primary Citation
Computer-aided design of a cyclic di-AMP synthesizing enzyme CdaA inhibitor.
Microlife 4 uqad021 uqad021 (2023)
PMID: 37223749 DOI: 10.1093/femsml/uqad021

Abstact

Cyclic di-AMP (c-di-AMP) is an essential secondary messenger regulating cell wall homeostasis and myriads of physiological processes in several Gram-positive and mycobacteria, including human pathogens. Hence, c-di-AMP synthesizing enzymes (DACs) have become a promising antibacterial drug target. To overcome a scarcity of small molecule inhibitors of c-di-AMP synthesizing enzyme CdaA, a computer-aided design of a new compound that should block the enzyme has been performed. This has led to the identification of a molecule comprising two thiazole rings and showing inhibitory potential based on ITC measurements. Thiazole scaffold is a good pharmacophore nucleus known due to its various pharmaceutical applications. It is contained in more than 18 FDA-approved drugs as well as in dozens of experimental drugs. Hence, the designed inhibitor can serve as a potent lead compound for further development of inhibitor against CdaA.

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