8C44 image
Entry Detail
PDB ID:
8C44
EMDB ID:
Keywords:
Title:
HB3VAR03 apo headstructure (PfEMP1 A) complexed with EPCR
Biological Source:
PDB Version:
Deposition Date:
2022-12-31
Release Date:
2023-08-16
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PfEMP1
Chain IDs:A
Chain Length:1259
Number of Molecules:1
Biological Source:Plasmodium falciparum HB3
Polymer Type:polypeptide(L)
Description:Endothelial protein C receptor
Chain IDs:B (auth: C)
Chain Length:168
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Endothelial protein C receptor binding induces conformational changes to severe malaria-associated group A PfEMP1.
Structure 31 1174 1183.e4 (2023)
PMID: 37582356 DOI: 10.1016/j.str.2023.07.011

Abstact

Severe Plasmodium falciparum malaria infections are caused by microvascular sequestration of parasites binding to the human endothelial protein C receptor (EPCR) via the multi-domain P. falciparum erythrocyte membrane protein 1 (PfEMP1) adhesion ligands. Using cryogenic electron microscopy (Cryo-EM) and PfEMP1 sequence diversity analysis, we found that group A PfEMP1 CIDRα1 domains interact with the adjacent DBLα1 domain through central, conserved residues of the EPCR-binding site to adopt a compact conformation. Upon EPCR binding, the DBLα1 domain is displaced, and the EPCR-binding helix of CIDRα1 is turned, kinked, and twisted to reach a rearranged, stable EPCR-bound conformation. The unbound conformation and the required transition to the EPCR-bound conformation may represent a conformational masking mechanism of immune evasion for the PfEMP1 family.

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Primary Citation of related structures