8C0P image
Entry Detail
PDB ID:
8C0P
Title:
Crystal structure of S. aureus BlaR1 sensor domain in complex with a boronate inhibitor
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2022-12-19
Release Date:
2024-07-10
Method Details:
Experimental Method:
Resolution:
1.97 Å
R-Value Free:
0.23
R-Value Work:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Regulatory protein BlaR1
Mutations:K369A K370A K372A
Chain IDs:A, B
Chain Length:254
Number of Molecules:2
Biological Source:Staphylococcus aureus
Ligand Molecules
Primary Citation
Restoring susceptibility to beta-lactam antibiotics in methicillin-resistant Staphylococcus aureus.
Nat.Chem.Biol. ? ? ? (2024)
PMID: 39060390 DOI: 10.1038/s41589-024-01688-0

Abstact

Infections by Staphylococcus aureus have been treated historically with β-lactam antibiotics. However, these antibiotics have become obsolete in methicillin-resistant S. aureus by acquisition of the bla and mec operons. The presence of the β-lactam antibiotic is detected by the sensor domains of BlaR and/or MecR, and the information is transmitted to the cytoplasm, resulting in derepression of the antibiotic-resistance genes. We hypothesized that inhibition of the sensor domain would shut down this response system, and β-lactam susceptibility would be restored. An in silico search of 11 million compounds led to a benzimidazole-based hit and, ultimately, to the boronate 4. The X-ray structure of 4 is covalently engaged with the active-site serine of BlaR. Compound 4 potentiates by 16- to 4,096-fold the activities of oxacillin and of meropenem against methicillin-resistant S. aureus strains. The combination of 4 with oxacillin or meropenem shows efficacy in infected mice, validating the strategy.

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Primary Citation of related structures