8BPF image
Entry Detail
PDB ID:
8BPF
EMDB ID:
Keywords:
Title:
FcMR binding at subunit Fcu1 of IgM pentamer
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-11-16
Release Date:
2023-04-12
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Immunoglobulin heavy constant mu
Chain IDs:A, B, C, D, E, F, G, H, K, L
Chain Length:348
Number of Molecules:10
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Fas apoptotic inhibitory molecule 3
Chain IDs:I
Chain Length:234
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Immunoglobulin J chain
Chain IDs:J
Chain Length:159
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis for Fc receptor recognition of immunoglobulin M.
Nat.Struct.Mol.Biol. 30 1033 1039 (2023)
PMID: 37095205 DOI: 10.1038/s41594-023-00985-x

Abstact

Immunoglobulin Fc receptors are cell surface transmembrane proteins that bind to the Fc constant region of antibodies and play critical roles in regulating immune responses by activation of immune cells, clearance of immune complexes and regulation of antibody production. FcμR is the immunoglobulin M (IgM) antibody isotype-specific Fc receptor involved in the survival and activation of B cells. Here we reveal eight binding sites for the human FcμR immunoglobulin domain on the IgM pentamer by cryogenic electron microscopy. One of the sites overlaps with the binding site for the polymeric immunoglobulin receptor (pIgR), but a different mode of FcμR binding explains its antibody isotype specificity. Variation in FcμR binding sites and their occupancy reflects the asymmetry of the IgM pentameric core and the versatility of FcμR binding. The complex explains engagement with polymeric serum IgM and the monomeric IgM B-cell receptor (BCR).

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Primary Citation of related structures