8BN0 image
Entry Detail
PDB ID:
8BN0
Title:
Bacteroides thetaiotaomicron surface protein BT1954 bound to
Biological Source:
PDB Version:
Deposition Date:
2022-11-11
Release Date:
2023-08-16
Method Details:
Experimental Method:
Resolution:
1.33 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Putative surface layer protein
Chain IDs:A
Chain Length:374
Number of Molecules:1
Biological Source:Bacteroides thetaiotaomicron VPI-5482
Primary Citation
BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun 14 4714 4714 (2023)
PMID: 37543597 DOI: 10.1038/s41467-023-40427-2

Abstact

Vitamin B12 (cobalamin) is required for most human gut microbes, many of which are dependent on scavenging to obtain this vitamin. Since bacterial densities in the gut are extremely high, competition for this keystone micronutrient is severe. Contrasting with Enterobacteria, members of the dominant genus Bacteroides often encode several BtuB vitamin B12 outer membrane transporters together with a conserved array of surface-exposed B12-binding lipoproteins. Here we show that the BtuB transporters from Bacteroides thetaiotaomicron form stable, pedal bin-like complexes with surface-exposed BtuG lipoprotein lids, which bind B12 with high affinities. Closing of the BtuG lid following B12 capture causes destabilisation of the bound B12 by a conserved BtuB extracellular loop, causing translocation of the vitamin to BtuB and subsequent transport. We propose that TonB-dependent, lipoprotein-assisted small molecule uptake is a general feature of Bacteroides spp. that is important for the success of this genus in colonising the human gut.

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