8BMT image
Entry Detail
PDB ID:
8BMT
EMDB ID:
Keywords:
Title:
Structure of GroEL:GroES-ATP complex plunge frozen 200 ms after reaction initiation
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-11-10
Release Date:
2023-08-09
Method Details:
Experimental Method:
Resolution:
2.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Chaperonin GroEL
Chain IDs:A (auth: I), C (auth: A), E (auth: C), G (auth: E), I (auth: G), K (auth: J), M (auth: L), O (auth: N), Q (auth: P), S (auth: R), U (auth: T), W (auth: X), Y (auth: Z), AA (auth: BA)
Chain Length:548
Number of Molecules:14
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Description:Co-chaperonin GroES
Chain IDs:B (auth: W), D (auth: B), F (auth: D), H (auth: F), J (auth: H), L (auth: K), N (auth: M), P (auth: O), R (auth: Q), T (auth: S), V, X (auth: Y), Z (auth: AA), BA (auth: CA)
Chain Length:98
Number of Molecules:14
Biological Source:Escherichia coli
Primary Citation
Time-resolved cryo-EM using a combination of droplet microfluidics with on-demand jetting.
Nat.Methods 20 1400 1408 (2023)
PMID: 37592181 DOI: 10.1038/s41592-023-01967-z

Abstact

Single-particle cryogenic electron microscopy (cryo-EM) allows reconstruction of high-resolution structures of proteins in different conformations. Protein function often involves transient functional conformations, which can be resolved using time-resolved cryo-EM (trEM). In trEM, reactions are arrested after a defined delay time by rapid vitrification of protein solution on the EM grid. Despite the increasing interest in trEM among the cryo-EM community, making trEM samples with a time resolution below 100 ms remains challenging. Here we report the design and the realization of a time-resolved cryo-plunger that combines a droplet-based microfluidic mixer with a laser-induced generator of microjets that allows rapid reaction initiation and plunge-freezing of cryo-EM grids. Using this approach, a time resolution of 5 ms was achieved and the protein density map was reconstructed to a resolution of 2.1 Å. trEM experiments on GroEL:GroES chaperonin complex resolved the kinetics of the complex formation and visualized putative short-lived conformations of GroEL-ATP complex.

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