8BJM image
Entry Detail
PDB ID:
8BJM
EMDB ID:
Title:
Human full length RAD52 undecamer.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-11-04
Release Date:
2023-11-15
Method Details:
Experimental Method:
Resolution:
2.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DNA repair protein RAD52 homolog
Chain IDs:A, B, C, D, E, F, G, H, I, J, K
Chain Length:432
Number of Molecules:11
Biological Source:Homo sapiens
Primary Citation
An integrative structural study of the human full-length RAD52 at 2.2 angstrom resolution.
Commun Biol 7 956 956 (2024)
PMID: 39112549 DOI: 10.1038/s42003-024-06644-1

Abstact

Human RAD52 (RAD52) is a DNA-binding protein involved in many DNA repair mechanisms and genomic stability maintenance. In the last few years, this protein was discovered to be a promising novel pharmacological target for anticancer strategies. Although the interest in RAD52 has exponentially grown in the previous decade, most information about its structure and mechanism still needs to be elucidated. Here, we report the 2.2 Å resolution cryo-EM reconstruction of the full-length RAD52 (FL-RAD52) protein. This allows us to describe the hydration shell of the N-terminal region of FL-RAD52, which is structured in an undecamer ring. Water molecules coordinate with protein residues to promote stabilization inside and among the protomers and within the inner DNA binding cleft to drive protein-DNA recognition. Additionally, through a multidisciplinary approach involving SEC-SAXS and computational methods, we comprehensively describe the highly flexible and dynamic organization of the C-terminal portion of FL-RAD52. This work discloses unprecedented structural details on the FL-RAD52, which will be critical for characterizing its mechanism of action and inhibitor development, particularly in the context of novel approaches to synthetic lethality and anticancer drug discovery.

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