ISDA: 8BH7

Deposition Date 2022-10-30

Release Date 2023-09-20

Last Version Date 2023-11-08

Entry Detail

PDB ID:

8BH7

Keywords:

TRANSLATION

Title:

The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus

Biological Source:

Source Organism:

Staphylococcus aureus subsp. aureus NCTC 8325 (Taxon ID: 93061)

Host Organism:

Escherichia coli 'BL21-Gold(DE3)pLysS AG'

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.23 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosome maturation factor RimP
Gene (Uniprot):rimP
Chain IDs:B (auth: A)
Chain Length:156
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2G2D3 Pfam ID:PF02576, PF17384

Polymer Type:polyribonucleotide
Molecule:16S ribosomal RNA
Chain IDs:A (auth: a)
Chain Length:156
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S2
Gene (Uniprot):rpsB
Chain IDs:C (auth: b)
Chain Length:255
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FZ25 Pfam ID:PF00318

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S3
Gene (Uniprot):rpsC
Chain IDs:E (auth: c)
Chain Length:217
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW12 Pfam ID:PF07650, PF00189

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S4
Gene (Uniprot):rpsD
Chain IDs:D (auth: d)
Chain Length:200
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FXK6 Pfam ID:PF00163, PF01479

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S5
Gene (Uniprot):rpsE
Chain IDs:F (auth: e)
Chain Length:166
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW23 Pfam ID:PF00333, PF03719

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S6
Gene (Uniprot):rpsF
Chain IDs:G (auth: f)
Chain Length:98
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2G113 Pfam ID:PF01250

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S7
Gene (Uniprot):rpsG
Chain IDs:H (auth: g)
Chain Length:156
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:P48940 Pfam ID:PF00177

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S8
Gene (Uniprot):rpsH
Chain IDs:I (auth: h)
Chain Length:132
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW20 Pfam ID:PF00410

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S9
Gene (Uniprot):rpsI
Chain IDs:L (auth: i)
Chain Length:132
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW39 Pfam ID:PF00380

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S10
Gene (Uniprot):rpsJ
Chain IDs:M (auth: j)
Chain Length:102
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q931G5 Pfam ID:PF00338

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S11
Gene (Uniprot):rpsK
Chain IDs:J (auth: k)
Chain Length:129
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW31 Pfam ID:PF00411

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S12
Chain IDs:K (auth: l)
Chain Length:137
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:P0A0H0 Pfam ID:PF00164

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S13
Gene (Uniprot):rpsM
Chain IDs:N (auth: m)
Chain Length:121
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW30 Pfam ID:PF00416

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S14 type Z
Gene (Uniprot):rpsZ
Chain IDs:O (auth: n)
Chain Length:61
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW19 Pfam ID:PF00253

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S15
Gene (Uniprot):rpsO
Chain IDs:Q (auth: o)
Chain Length:89
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2G2Q1 Pfam ID:PF00312

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S16
Gene (Uniprot):rpsP
Chain IDs:R (auth: p)
Chain Length:91
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FZ45 Pfam ID:PF00886

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S17
Gene (Uniprot):rpsQ
Chain IDs:S (auth: q)
Chain Length:87
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW15 Pfam ID:PF00366

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S18
Gene (Uniprot):rpsR
Chain IDs:T (auth: r)
Chain Length:80
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2G111 Pfam ID:PF01084

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S19
Gene (Uniprot):rpsS
Chain IDs:P (auth: s)
Chain Length:92
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FW10 Pfam ID:PF00203

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S20
Gene (Uniprot):rpsT
Chain IDs:U (auth: t)
Chain Length:83
Number of Molecules:1
Biological Source:Staphylococcus aureus subsp. aureus NCTC 8325

UniProt ID:Q2FXY6 Pfam ID:PF01649

Ligand Molecules

Primary Citation

Ribosome maturation factor P (RimP) from Staphylococcus aureus

Garaeva, N, Usachev, K.Show

Structure ? ? ? (2023)

Primary Citation of related structures