8BFI image
Entry Detail
PDB ID:
8BFI
Title:
human CNOT1-CNOT10-CNOT11 module
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-10-26
Release Date:
2022-12-28
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.28
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:CCR4-NOT transcription complex subunit 1
Chain IDs:A
Chain Length:778
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:CCR4-NOT transcription complex subunit 10
Chain IDs:B
Chain Length:718
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:CCR4-NOT transcription complex subunit 11
Chain IDs:C
Chain Length:455
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
The human CNOT1-CNOT10-CNOT11 complex forms a structural platform for protein-protein interactions.
Cell Rep 42 111902 111902 (2023)
PMID: 36586408 DOI: 10.1016/j.celrep.2022.111902

Abstact

The evolutionary conserved CCR4-NOT complex functions in the cytoplasm as the main mRNA deadenylase in both constitutive mRNA turnover and regulated mRNA decay pathways. The versatility of this complex is underpinned by its modular multi-subunit organization, with distinct structural modules actuating different functions. The structure and function of all modules are known, except for that of the N-terminal module. Using different structural approaches, we obtained high-resolution data revealing the architecture of the human N-terminal module composed of CNOT1, CNOT10, and CNOT11. The structure shows how two helical domains of CNOT1 sandwich CNOT10 and CNOT11, leaving the most conserved domain of CNOT11 protruding into solvent as an antenna. We discovered that GGNBP2, a protein identified as a tumor suppressor and spermatogenic factor, is a conserved interacting partner of the CNOT11 antenna domain. Structural and biochemical analyses thus pinpoint the N-terminal CNOT1-CNOT10-CNOT11 module as a conserved protein-protein interaction platform.

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Primary Citation of related structures